Fixed incorrect parameters for un-retraction moves when z-hop,
orthogonal axis compensation and pressure advance are all enabled
Further refactoring of SD_HSMCI library in preparation for moving hsmci,
dmac and rtc modules into CoreDuet
Merged in chrishamm's changes to Network, PrintMonitor, and his support
for firmware updates from SD card
Fixed print monitor issue that threw out the layer count and time
estimates when there was an initial extruder priming move in the start
gcode
Got rid of most of module SamNonDuePin because CoreDuet now provides the
required functionality
No need to define function watchdogSetup any more because the core no
longer calls it
Switched to the new build system that doesn't need the Eclipse Arduino
plugin and uses the CoreDuet project instead of Arduino to provide
hardware support
